rs58784361 chr3:137153198 C>A
- Sequence
attgaaactgacccgtctctagcc[C/A]ttgggtggtgctgtgacacctaag
- ASB in cell types
- 22RV1 (prostate carcinoma) GM23338 GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.12 | 2.43 | 1.12 | 2.59 | Concordant |
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Motif analysis
