rs58797705 chr1:59317455 C>A
- Sequence
aagtgacacgatgatgatccttat[C/A]cttgtttactttacaaactagaaa
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.69 | -0.24 | 1.54 | -0.54 | Weak Concordant |
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Motif analysis
