rs58802809 chr1:53321503 T>C
- Sequence
gagagcatgcatgcatttacttcc[T/C]tcaagggcgtgcctgttccatccg
- ASB in cell types
- GM17942 (lymphoblastoid cell)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.66 | -0.35 | 1.00 | 2.97 | Discordant |
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Motif analysis
