rs58885740 chr3:15364200 G>A
- Sequence
ctctgtgctaaagggtggaaggct[G/A]ccctggcacaacataatctaagcc
- ASB in cell types
- liver LHSAR (prostate epithelial cells)
- ASB for transcription factors
- HNF4A_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HNF4A_HUMAN | 2.03 | -1.05 | 1.83 | 0.70 | Weak Discordant | |||
| ANDR_HUMAN | 1.38 | -0.25 | 1.50 | n/a | No Hit |
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Motif analysis
