rs58890378 chr18:35231131 G>T
- Sequence
ggctccgctaggatccttctgaac[G/T]tgccctgctttaaatggccaacag
- ASB in cell types
- neutrophils from periferal blood adult erythroblasts
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN KDM6A_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 3.55 | -0.41 | 1.83 | n/a | n/a | |||
| CTCF_HUMAN | 0.63 | 0.79 | 1.13 | n/a | No Hit | |||
| KDM6A_HUMAN | 2.05 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Hippocampus, Cells_Cultured_fibroblasts, Nerve_Tibial, Pancreas, Testis, Thyroid, Vagina