rs58894370 chr14:74018679 C>T
- Sequence
gcggtcgtgggcaggaagtatcgg[C/T]cacacaggacctagtgaggccgag
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ZN341_HUMAN ANDR_HUMAN PKNX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN341_HUMAN | 1.18 | -1.18 | 1.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.71 | -1.91 | 2.00 | n/a | No Hit | |||
| PKNX1_HUMAN | -2.13 | 2.27 | 1.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Heart_Atrial_Appendage, Liver, Lung, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid, Uterus, Whole_Blood