rs58933160 chr5:43058280 T>C
- Sequence
gtaacgctagccccaaccctgtgg[T/C]cacagaaatatttgctgtgttgac
- ASB in cell types
- HepG2 (hepatoblastoma) VCaP (prostate carcinoma) MDA-MB-231 (breast adenocarcinoma) LHSAR (prostate epithelial cells)
- ASB for transcription factors
- ANDR_HUMAN BRD4_HUMAN FOXA1_HUMAN TEAD1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.87 | -0.02 | 1.88 | n/a | No Hit | |||
| BRD4_HUMAN | 1.84 | -0.66 | 1.57 | n/a | n/a | |||
| FOXA1_HUMAN | 1.40 | 0.07 | 1.85 | n/a | No Hit | |||
| TEAD1_HUMAN | 2.47 | -2.17 | 1.00 | n/a | No Hit |
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