rs58954825 chr1:160162488 C>T
- Sequence
agcagaggtcagattggctccagc[C/T]agcaaagcagggagggggcgcaag
- ASB in cell types
- GM19239 (male B-cells lymphoblastoid cell line) GM19240 (B cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -1.12 | 1.29 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.41 | 0.79 | 1.44 | n/a | No Hit |
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