rs58968569 chr15:55108966 A>T
- Sequence
tttttgtttttttttgtttttaaa[A/T]gctgtgttctgctttttttttcat
- ASB in cell types
- 22RV1 (prostate carcinoma) ID00014 (lymphoblastoid cell, DiGeorge syndrome) neural cell foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.20 | 0.00 | 1.85 | n/a | No Hit | |||
| RAD21_HUMAN | 1.99 | -1.77 | 1.00 | n/a | n/a |
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