rs58983690 chr3:197554836 A>G
- Sequence
cacgcccaaggcgcctgggccgct[A/G]gggaccgaccggagcgctcaaacc
- ASB in cell types
- HEK293 (embryonic kidney) esophagus squamous epithelium tibial nerve
- ASB for transcription factors
- KLF10_HUMAN CTCF_HUMAN HIF3A_HUMAN ZN600_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KLF10_HUMAN | 2.96 | n/a | 3.00 | n/a | No Hit | |||
| CTCF_HUMAN | 1.25 | 0.54 | 2.31 | -2.68 | Concordant | |||
| HIF3A_HUMAN | n/a | 3.19 | 4.00 | n/a | No Hit | |||
| ZN600_HUMAN | 3.02 | n/a | 2.00 | n/a | n/a | |||
| ZFX_HUMAN | -1.11 | 1.59 | 1.00 | n/a | No Hit |
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Motif analysis
