rs58999542 chr3:172285497 A>T
- Sequence
gtaaacaagtaaaaacaagtaaat[A/T]aacaagtaaaaatacagctcaaag
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.86 | 0.16 | 1.45 | -4.57 | Concordant | |||
| ANDR_HUMAN | 1.45 | -0.19 | 1.69 | -3.33 | Concordant |
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Motif analysis
