rs59000808 chr2:132268544 A>C
- Sequence
ctgatcaaagaacaatagggcccc[A/C]gccagggcagaggttccctaggca
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) GM18486 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.97 | -2.09 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.46 | -1.50 | 2.00 | 3.39 | Discordant |
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Motif analysis
