rs59033795 chr5:181192093 T>A

Sequence
caggattggggagcacgttttgcg[T/A]cttgctgtgcgtgaggaagcgggg
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) MDA-MB-157 (triple negative breast carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma) 0.23 1.33 1.001.0·10-5 2.97
MDA-MB-157 (triple negative breast carcinoma) 1.79 -1.06 0.031.00 1.00
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial Breast_Mammary_Tissue Esophagus_Mucosa

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