rs59112743 chr6:15691547 G>A
- Sequence
gctcctggcgctgagctcctcact[G/A]gagagggtagggagagtctaccgt
- ASB in cell types
- adult erythroblasts K562 (myelogenous leukemia) erythroid cells GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- KDM6A_HUMAN STAG1_HUMAN ANDR_HUMAN REST_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM6A_HUMAN | 2.56 | n/a | 2.00 | n/a | n/a | |||
| STAG1_HUMAN | 0.66 | 0.58 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.13 | -0.34 | 2.00 | n/a | No Hit | |||
| REST_HUMAN | 0.82 | n/a | 3.00 | -1.61 | Weak Concordant | |||
| CTCF_HUMAN | 1.26 | 0.44 | 1.38 | n/a | No Hit |
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Motif analysis
