rs5912774 chrX:79144411 T>C

Sequence
ccctaagattgcggtggcccacta[T/C]ctatgcaagcaactcgagggctcc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN n/a 2.61 1.004.7·10-4 3.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP graves disease
GTEx eQTL Adipose_Visceral_Omentum,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Lung,  Nerve_Tibial,  Stomach,  Testis,  Thyroid,  Whole_Blood

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