rs59129772 chr3:182794412 C>G

Sequence
gccggtctagcttcggaaacgata[C/G]gtattgtacgatagttacgaacga
ASB in cell types
MOLT-4 (Adult T acute lymphoblastic leukemia) embryonic kidney Th1-cells
ASB for transcription factors
SPT5H_HUMAN GCR_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPT5H_HUMAN 3.04 -1.59 1.1·10-71.00 1.00 n/a n/a
GCR_HUMAN 2.22 0.60 0.020.64 1.12 n/a No Hit
ANDR_HUMAN 2.03 -1.20 0.031.00 2.25 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Cells_Cultured_fibroblasts Lung Testis Thyroid

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