rs59149801 chr1:110328828 T>C
- Sequence
tttggttgggaaaagtgagacaac[T/C]tgaagcggggaggcagcttccagg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ARI1B_HUMAN TAL1_HUMAN NCOR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARI1B_HUMAN | 1.32 | -1.32 | 1.00 | n/a | n/a | |||
| TAL1_HUMAN | 1.59 | -2.75 | 1.50 | n/a | No Hit | |||
| NCOR1_HUMAN | 1.64 | -0.69 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Coronary, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Ovary, Skin_Not_Sun_Exposed_Suprapubic, Testis, Thyroid