rs59165976 chr19:7198460 G>C
- Sequence
accgagcttgcaagggctcatcaa[G/C]catccaccggggtggcttaggctg
- ASB in cell types
- MDA-MB-231 (breast adenocarcinoma) MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line) K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- BRD2_HUMAN JUN_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD2_HUMAN | 1.03 | 1.90 | 2.33 | n/a | n/a | |||
| JUN_HUMAN | -0.05 | 1.47 | 2.12 | n/a | No Hit | |||
| IKZF1_HUMAN | -0.69 | 1.60 | 1.33 | n/a | n/a |
Items per page:
1 – 3 of 3