rs59197089 chr7:155521955 A>G
- Sequence
tatctccggaagggcaggtcccca[A/G]ctgctcatgcccctgccaaatcat
- ASB in cell types
- HepG2 (hepatoblastoma) SU-DHL-2 (anaplastic large cell lymphoma)
- ASB for transcription factors
- ATF2_HUMAN ITF2_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | 3.96 | -3.62 | 1.00 | n/a | No Hit | |||
| ITF2_HUMAN | n/a | 2.41 | 2.00 | 2.92 | Concordant | |||
| CREB1_HUMAN | 2.05 | -1.75 | 1.00 | n/a | No Hit |
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Motif analysis
