rs59254413 chr11:86193552 A>T
- Sequence
tgtcataatctcaccttttttttt[A/T]aaaaaataatgtcaatgtttttcc
- ASB in cell types
- macrophages form periferal blood GM18505 (female B-cells Lymphoblastoid Cell Lines) CD14+ monocytes GM18951 (B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN SPI1_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.86 | 0.51 | 1.19 | n/a | No Hit | |||
| SPI1_HUMAN | 1.87 | 0.19 | 1.73 | n/a | No Hit | |||
| STAT1_HUMAN | 2.13 | -1.40 | 2.00 | 1.44 | Weak Discordant |
Items per page:
1 – 3 of 3
Motif analysis
