rs59332413 chr8:73174447 G>C
- Sequence
gagagcttcggtgagttcatcctc[G/C]gctccctgctttcccagacgtccc
- ASB in cell types
- HMEC (human mammary epithelial cells) WA01 (H1, human embryonic stem cells) THP-1 (acute monocytic leukemia) CD34+ stem cells-derived erythroblasts
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.13 | 0.46 | 1.46 | 2.29 | Discordant | |||
| RAD21_HUMAN | 1.12 | 0.32 | 1.90 | n/a | n/a | |||
| STAG1_HUMAN | 1.16 | -0.13 | 1.00 | n/a | n/a |
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Motif analysis
