rs59367899 chr12:108620465 T>C
- Sequence
accatgcgcattcatttatggaca[T/C]attgtcagtggctgcttttgtact
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells) HepG2 (hepatoblastoma)
- ASB for transcription factors
- TCF21_HUMAN PPARG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 2.42 | -1.96 | 1.00 | -3.98 | Concordant | |||
| PPARG_HUMAN | 1.49 | 0.85 | 2.00 | n/a | No Hit |
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Motif analysis
