rs59368208 chr11:75340892 G>A
- Sequence
atctgccgtgggtgaggggccaga[G/A]gggagtggcgccagcagccccagc
- ASB in cell types
- CD14+ monocytes CD34+ hematopoietic stem cells THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- STAT1_HUMAN TIF1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.41 | n/a | 3.00 | n/a | No Hit | |||
| TIF1B_HUMAN | 2.44 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Colon_Sigmoid, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Pancreas, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid, Whole_Blood