rs59448707 chr6:12357834 C>A
- Sequence
ccctctattgcccaggctgggacc[C/A]caggcatgtgatgcaccaccacat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) 2588 (Lymphoblastoid Cell Lines) GM18486 (Lymphoblastoid Cell Lines) GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN IKZF2_HUMAN RAD51_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.23 | 1.60 | 1.21 | n/a | No Hit | |||
| STAG1_HUMAN | -0.53 | 2.25 | 1.15 | n/a | n/a | |||
| IKZF2_HUMAN | -0.58 | 1.81 | 1.00 | n/a | n/a | |||
| RAD51_HUMAN | -1.36 | 1.64 | 1.00 | n/a | n/a |
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