rs59478886 chr8:23421661 G>A
- Sequence
ggcaatgctgaaatccacggttct[G/A]tggttaggggcacaagtacaaagc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) SUP-B15 (Childhood B acute lymphoblastic leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 1.24 | 0.00 | 1.09 | |||
| SUP-B15 (Childhood B acute lymphoblastic leukemia) | 2.06 | -3.55 | 1.50 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood