rs59533874 chr3:150385051 T>C
- Sequence
ttcacgtggtaggtcacagagcag[T/C]aggggaaagggaagtggtgatgca
- ASB in cell types
- HEK293 (embryonic kidney) neutrophils
- ASB for transcription factors
- CTCF_HUMAN ZN600_HUMAN ZNF18_HUMAN PRDM1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.66 | 0.73 | 1.27 | n/a | No Hit | |||
| ZN600_HUMAN | 2.87 | -2.94 | 1.00 | n/a | n/a | |||
| ZNF18_HUMAN | 2.77 | -4.84 | 1.50 | n/a | No Hit | |||
| PRDM1_HUMAN | 2.62 | -2.34 | 1.00 | 0.38 | Weak Discordant | |||
| ZN362_HUMAN | 2.76 | -2.50 | 1.00 | n/a | No Hit |
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Motif analysis
