rs59578690 chr20:8523909 C>T
- Sequence
ccacccagaggcctgcatggggag[C/T]gtgtgttgtatggaatcaactggg
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) pancreas adrenal gland GM19193 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.19 | 1.90 | 1.30 | -2.03 | Discordant |
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Motif analysis
