rs59612974 chr2:138917217 C>T
- Sequence
cttctacctgtagggtaactgctg[C/T]cttctacctgtaggggaagcgctt
- ASB in cell types
- WA01 (H1, human embryonic stem cells) HCT-116 (colon carcinoma) HCT-116-RAD21-mAC
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.93 | -0.35 | 1.09 | -2.87 | Concordant |
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Motif analysis
