rs5961886 chrX:5917162 C>T

Sequence
ggcgaccataaattgccctgaaca[C/T]cttgcctgagcacaccttcctgtg
ASB in cell types
SK-N-SH (neuroblastoma) K562 (myelogenous leukemia)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
SK-N-SH (neuroblastoma) n/a 3.00 1.005.1·10-4 1.00
K562 (myelogenous leukemia) -0.04 1.37 1.000.02 1.00
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  serum creatinine
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Ovary,  Skin_Sun_Exposed_Lower_leg,  Testis

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