rs59639651 chr2:195544426 A>G
- Sequence
ttttccatggaaagctatttaact[A/G]gaaaaactcaactcagcagctaat
- ASB in cell types
- CFPAC-1(pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | -0.00 | 1.63 | 2.00 | -1.72 | Weak Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Adrenal_Gland, Cells_EBV-transformed_lymphocytes, Small_Intestine_Terminal_Ileum, Spleen, Testis, Thyroid