rs59740956 chr14:37197867 C>T
- Sequence
tcctggaggccccgcctcgcggcc[C/T]ggcagcgcggcacgcgcatgcccg
- ASB in cell types
- HeLa (cervical adenocarcinoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- TYY1_HUMAN INT11_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 2.56 | n/a | 2.00 | n/a | No Hit | |||
| INT11_HUMAN | -0.76 | 1.65 | 2.00 | n/a | n/a | |||
| GCR_HUMAN | 0.01 | 1.00 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Testis, Thyroid