rs59990398 chr11:60844890 T>G
- Sequence
ttgctcagatcttgggtaaacatg[T/G]ctgtgaacaaaaagtctctgctct
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- SKI_HUMAN SOX13_HUMAN ZNF24_HUMAN FOXA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SKI_HUMAN | 3.38 | n/a | 1.00 | n/a | n/a | |||
| SOX13_HUMAN | 2.45 | -4.13 | 1.50 | n/a | No Hit | |||
| ZNF24_HUMAN | 2.94 | n/a | 3.50 | n/a | No Hit | |||
| FOXA3_HUMAN | 2.91 | -4.86 | 1.50 | -0.63 | Weak Concordant | |||
| SUH_HUMAN | 2.42 | -2.26 | 1.00 | n/a | No Hit |
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Motif analysis
