rs6006956 chr22:45247026 T>C

Sequence
ccctgccgtatgcccggagcttca[T/C]ggatgtggacaactagaacccctg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN RAD51_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -3.25 2.13 1.005.2·10-4 1.28 n/a n/a
RAD51_HUMAN n/a 2.40 1.000.02 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_EBV-transformed_lymphocytes Muscle_Skeletal Spleen Thyroid Whole_Blood

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