rs6018587 chr20:47610904 T>C

Sequence
attgctggacagggctaactttag[T/C]actatagtgggaagtttgttattt
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
NFXL1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFXL1_HUMAN 2.77 -5.29 0.021.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  total cholesterol
GTEx eQTL Artery_Aorta,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Nerve_Tibial,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Stomach,  Thyroid,  Whole_Blood

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