rs6019859 chr20:49475520 T>A
- Sequence
gctaaggtcaagtgcttcccatcc[T/A]gatgacattatcaagtacaggaag
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- ATF7_HUMAN ATF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF7_HUMAN | -3.92 | 3.81 | 1.00 | -3.37 | Discordant | |||
| ATF2_HUMAN | n/a | 3.86 | 5.00 | -3.10 | Discordant |
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Motif analysis
