rs6021451 chr20:51802856 T>G

Sequence
ttacgtagaagttttggaacggct[T/G]tatttggtagttacttgctccaaa
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
GATA3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA3_HUMAN n/a 3.23 1.000.01 4.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP college completion,  infant head circumference,  refractive error,  tetrology of fallot,  total cholesterol,  years of education
GTEx eQTL Cells_Cultured_fibroblasts,  Lung,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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