rs6022641 chr20:53657469 T>C

Sequence
gatctgaatcagataatacacata[T/C]gtagaatctttaggaccaaaccac
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
PKNX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN -5.38 3.40 1.005.5·10-5 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose ldl cholesterol serum creatinine total cholesterol waist hip ratio

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