rs6022859 chr20:53937345 C>T
- Sequence
atttttctttgctttttctcctcc[C/T]tcctttcttttttctagataagcc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NCOR1_HUMAN TAL1_HUMAN ARI1B_HUMAN KDM1A_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NCOR1_HUMAN | 3.33 | n/a | 2.50 | n/a | n/a | |||
| TAL1_HUMAN | 2.92 | n/a | 2.00 | 0.36 | Weak Discordant | |||
| ARI1B_HUMAN | 1.82 | n/a | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | 2.40 | -0.98 | 2.00 | n/a | n/a | |||
| HTF4_HUMAN | 2.16 | 0.25 | 2.00 | n/a | No Hit |
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Motif analysis
