rs6022985 chr20:54149074 C>G
- Sequence
ggacatgtttattttggtttgccc[C/G]tgtacccatgatgcttggcttaca
- ASB in cell types
- T47D (invasive ductal carcinoma) SUM159PT (Triple negative breast cancer)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.18 | 1.78 | 1.34 | n/a | No Hit |
Items per page:
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (geographic atrophy), fasting blood glucose, parkinsons disease