rs6034530 chr20:16560444 T>C
- Sequence
cagtgaggtgagaccacaggcccc[T/C]ggggcaaaggacaccaagttcctg
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.07 | 1.39 | 2.17 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, infant head circumference, triglycerides, urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Heart_Left_Ventricle, Nerve_Tibial, Pituitary, Testis, Thyroid, Whole_Blood