rs6035128 chr20:18779180 T>A
- Sequence
ttcttactacctcctgaagagggc[T/A]gcttctgtatgaggacatggaaag
- ASB in cell types
- GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.78 | 2.41 | 1.17 | 2.43 | Concordant |
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Motif analysis
