rs6042585 chr20:1492172 A>T

Sequence
taatcttgccaattcatgcaatcc[A/T]ggcaatctctttagccacactgtc
ASB in cell types
monocyte-derived macrophages from peripheral blood MDM(monocyte derived macrophages)
ASB for transcription factors
SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 2.56 0.19 5.0·10-51.00 3.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Breast_Mammary_Tissue,  Colon_Transverse,  Esophagus_Muscularis,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Whole_Blood

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