rs6051787 chr20:3358787 T>C

Sequence
ttaaatattgttcctcactaattg[T/C]actgaagctctttggtgaaatggc
ASB in cell types
liver VCaP (prostate carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
liver 1.70 -0.64 0.031.00 1.00
VCaP (prostate carcinoma) 1.74 -1.44 0.041.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol change with statins,  rheumatoid arthritis
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Tibial,  Brain_Cerebellum,  Lung,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Thyroid,  Whole_Blood

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