rs61537129 chr8:94895889 G>T

Sequence
gagcccgctccgccggccttgcgc[G/T]gcgcgcccagggaaggcatttcca
ASB in cell types
BEAS-2B (bronchial epithelium) 22RV1 (prostate carcinoma)
ASB for transcription factors
ZN528_HUMAN GCR_HUMAN RBM25_HUMAN RBBP5_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN528_HUMAN -1.72 2.17 1.004.5·10-3 1.50 n/a No Hit
GCR_HUMAN 1.40 0.54 0.011.00 1.00 n/a No Hit
RBM25_HUMAN -0.31 1.54 1.000.03 4.00 n/a n/a
RBBP5_HUMAN n/a 2.62 1.000.03 2.00 n/a n/a
ANDR_HUMAN -0.74 2.25 1.000.03 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Heart_Atrial_Appendage,  Lung,  Nerve_Tibial,  Ovary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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