ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs61783469
chr1:9290312
C
>
T
Sequence
gagcccttctgacacataaactgg[C/T]ttccaggattgctcaacattgccc
ASB in cell types
monocytes from periferal blood
MSC (mesenchymal stem cells)
MDM(monocyte derived macrophages)
ASB for transcription factors
SRBP2_HUMAN
TF65_HUMAN
RXRA_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRBP2_HUMAN
3.33
n/a
5.9·10
-4
1.00
3.00
n/a
No Hit
TF65_HUMAN
1.89
-0.05
2.3·10
-3
1.00
2.17
n/a
No Hit
RXRA_HUMAN
-1.61
2.18
1.00
0.04
1.00
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Thyroid
,
Whole_Blood
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)