rs61839103 chr10:38528169 A>T
- Sequence
aaagaaatggactctaatggaatg[A/T]aatgttgtggacttgaatggaata
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma) HCT-116 (colon carcinoma)
- ASB for transcription factors
- CTCF_HUMAN ZFX_HUMAN A0A126GW21_HUMAN GCR_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.49 | 2.08 | 2.28 | n/a | No Hit | |||
| ZFX_HUMAN | n/a | 3.04 | 3.33 | n/a | No Hit | |||
| A0A126GW21_HUMAN | -1.90 | 2.22 | 1.50 | n/a | n/a | |||
| GCR_HUMAN | -0.37 | 1.95 | 2.67 | n/a | No Hit | |||
| TLX1_HUMAN | -2.45 | 2.39 | 1.00 | n/a | n/a |
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