rs61878849 chr11:12989456 C>A

Sequence
agaaaggaggtttaattaactcac[C/A]gttccgcatggctggggaggcctc
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZSA5C_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZSA5C_HUMAN 4.03 -4.17 1.2·10-71.00 1.00 2.51 Discordant
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Motif analysis

ZSA5C_HUMAN Discordant
ZSA5C_HUMAN pic

Genetic associations

GRASP breast cancer
GTEx eQTL Brain_Cerebellum,  Brain_Putamen_basal_ganglia,  Esophagus_Mucosa,  Kidney_Cortex,  Pituitary,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Vagina,  Whole_Blood

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