rs62119329 chr19:44685438 A>G
- Sequence
cttctagaagctggaggagggcca[A/G]gctcagtggctcacgcctgcagtc
- ASB in cell types
- HUVEC-C (HUVEC, umbilical vein endothelial cells) A549 (lung carcinoma)
- ASB for transcription factors
- NOTC1_HUMAN TF65_HUMAN EP300_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NOTC1_HUMAN | 2.24 | -3.73 | 1.50 | n/a | n/a | |||
| TF65_HUMAN | 2.24 | -1.18 | 1.50 | n/a | No Hit | |||
| EP300_HUMAN | 2.55 | 0.12 | 1.67 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Muscle_Skeletal, Pituitary, Thyroid