rs62120578 chr19:44713297 A>G
- Sequence
ctctagaagctgaaaatgtcaggt[A/G]ctcactttcccaaactgccttgca
- ASB in cell types
- Ishikawa (endometrial adenocarcinoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- USF1_HUMAN RAD51_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| USF1_HUMAN | 3.08 | -3.73 | 1.50 | 4.40 | Discordant | |||
| RAD51_HUMAN | 2.00 | n/a | 2.00 | n/a | n/a |
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Motif analysis
