rs62120967 chr19:41308611 A>G
- Sequence
ttggtggctaaaagggaccctaga[A/G]tgcgccagagaggaggtggcaggg
- ASB in cell types
- Th1-cells OCI-LY7 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- TBX21_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX21_HUMAN | -1.74 | 2.06 | 1.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.51 | 1.36 | 1.38 | 2.57 | Concordant |
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Motif analysis
